PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_690904g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 160aa    MW: 17694.1 Da    PI: 8.4918
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_690904g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000151221571555
                     HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +++  L++l+ +      +K++ a++L +A+ YI+ Lq
  MA_690904g0010 122 KLEERITVLQQLVSPF-----GKMDTASVLLEAIGYIRFLQ 157
                     5667888888888887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.899107156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-8119160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.32E-5121160No hitNo description
Gene3DG3DSA:4.10.280.104.9E-7121160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MHKITSSSKI SSKVISLKPS FQCPDFTSFC SKPYIINHPT HGISDQHQDL VDTVDESSSV  60
LFSDNLHQKS SKPLEETEDA APKKKRTSSV MQNSDNAGPG NVACKRARTS DASLKVNVKK  120
EKLEERITVL QQLVSPFGKM DTASVLLEAI GYIRFLQDQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18187PKKKRTS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1085220.0BT108522.1 Picea glauca clone GQ03123_B06 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13421337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.13e-15bHLH family protein